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Cluster: HRGMv2_4536_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4536_91 HRGMv2_4536_91_29 37891 40503 + CBM67 | GH78
CAZyme HRGMv2_4536_91 HRGMv2_4536_91_30 40658 43057 - GH2
CAZyme HRGMv2_4536_91 HRGMv2_4536_91_31 43071 43811 - CE4
pfam HRGMv2_4536_91 HRGMv2_4536_91_32 43814 44938 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_4536_91 HRGMv2_4536_91_33 44951 46414 - GH43_35
TF HRGMv2_4536_91 HRGMv2_4536_91_34 46479 47501 + HTH_AraC
TC HRGMv2_4536_91 HRGMv2_4536_91_35 47505 48977 - 2.A.2.1.1
Gene ID: HRGMv2_4536_91_29
Type: CAZyme
Location: 37891 - 40503 (+)
Gene ID: HRGMv2_4536_91_30
Type: CAZyme
Location: 40658 - 43057 (-)
Gene ID: HRGMv2_4536_91_31
Type: CAZyme
Location: 43071 - 43811 (-)
Gene ID: HRGMv2_4536_91_32
Type: pfam
Location: 43814 - 44938 (-)
Gene ID: HRGMv2_4536_91_33
Type: CAZyme
Location: 44951 - 46414 (-)
Gene ID: HRGMv2_4536_91_34
Type: TF
Location: 46479 - 47501 (+)
Gene ID: HRGMv2_4536_91_35
Type: TC
Location: 47505 - 48977 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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