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Genome Details

Selected Rep_genome_ID: HRGMv2_4317
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Caccovicinus
→
Species
Caccovicinus sp017889125
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_4317 3,851,768 96.83% 0.791% Japan Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_4317_CGC33 CGCFAM_00006 Yes 10 2
HRGMv2_4317_CGC26 CGCFAM_00011 Yes 10 6
HRGMv2_4317_CGC8 CGCFAM_00027 Yes 3 1
HRGMv2_4317_CGC13 CGCFAM_00057 Yes 3 1
HRGMv2_4317_CGC21 CGCFAM_00157 Yes 4 1
HRGMv2_4317_CGC6 CGCFAM_00167 Yes 3 1
HRGMv2_4317_CGC29 CGCFAM_00201 Yes 9 2
HRGMv2_4317_CGC7 CGCFAM_00226 Yes 6 3 beta-mannan
HRGMv2_4317_CGC31 CGCFAM_00259 Yes 6 2
HRGMv2_4317_CGC30 CGCFAM_00285 Yes 4 1
HRGMv2_4317_CGC36 CGCFAM_00335 Yes 6 2
HRGMv2_4317_CGC14 CGCFAM_00347 Yes 8 1
HRGMv2_4317_CGC44 CGCFAM_00458 Yes 5 3
HRGMv2_4317_CGC16 CGCFAM_00499 Yes 3 2
HRGMv2_4317_CGC43 CGCFAM_00557 Yes 8 3
HRGMv2_4317_CGC40 CGCFAM_00674 Yes 4 2
HRGMv2_4317_CGC37 CGCFAM_00682 Yes 5 2
HRGMv2_4317_CGC41 CGCFAM_00741 Yes 6 3
HRGMv2_4317_CGC3 CGCFAM_00775 Yes 3 1
HRGMv2_4317_CGC11 CGCFAM_00869 Yes 5 1
HRGMv2_4317_CGC28 CGCFAM_00972 Yes 3 1
HRGMv2_4317_CGC24 CGCFAM_01400 Yes 8 3
HRGMv2_4317_CGC47 CGCFAM_02574 Yes 4 2
HRGMv2_4317_CGC34 CGCFAM_03714 Yes 3 1
HRGMv2_4317_CGC10 CGCFAM_04546 Yes 6 1
Top CAZyme Families