Cluster: HRGMv2_4317_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_03714
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_213 | HRGMv2_4317_213_4 | 2482 | 4038 | + | CBM50 |
| pfam | HRGMv2_4317_213 | HRGMv2_4317_213_5 | 4364 | 4636 | + | GIY-YIG |
| TC | HRGMv2_4317_213 | HRGMv2_4317_213_6 | 4768 | 5418 | - | 1.C.113.1.2 |
Gene ID: HRGMv2_4317_213_4
Type: CAZyme
Location: 2482 - 4038 (+)
Type: CAZyme
Location: 2482 - 4038 (+)
Gene ID: HRGMv2_4317_213_5
Type: pfam
Location: 4364 - 4636 (+)
Type: pfam
Location: 4364 - 4636 (+)
Gene ID: HRGMv2_4317_213_6
Type: TC
Location: 4768 - 5418 (-)
Type: TC
Location: 4768 - 5418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.