Cluster: HRGMv2_4317_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00499
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_109 | HRGMv2_4317_109_19 | 16287 | 18530 | - | GH3 |
| TC | HRGMv2_4317_109 | HRGMv2_4317_109_20 | 18547 | 19950 | - | 2.A.2.3.1 |
| CAZyme | HRGMv2_4317_109 | HRGMv2_4317_109_21 | 19990 | 22257 | - | GH2 |
Gene ID: HRGMv2_4317_109_19
Type: CAZyme
Location: 16287 - 18530 (-)
Type: CAZyme
Location: 16287 - 18530 (-)
Gene ID: HRGMv2_4317_109_20
Type: TC
Location: 18547 - 19950 (-)
Type: TC
Location: 18547 - 19950 (-)
Gene ID: HRGMv2_4317_109_21
Type: CAZyme
Location: 19990 - 22257 (-)
Type: CAZyme
Location: 19990 - 22257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.