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Cluster: HRGMv2_4317_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4317_179 HRGMv2_4317_179_2 619 1578 + GT2
pfam HRGMv2_4317_179 HRGMv2_4317_179_3 1562 3556 + DUF6020
peptidase HRGMv2_4317_179 HRGMv2_4317_179_4 3583 4887 + S11.004
TC HRGMv2_4317_179 HRGMv2_4317_179_5 5104 6540 + 3.B.1.1.5
pfam HRGMv2_4317_179 HRGMv2_4317_179_6 6558 7379 + OAD_gamma
TC HRGMv2_4317_179 HRGMv2_4317_179_7 7435 7851 + 3.B.1.1.2
TC HRGMv2_4317_179 HRGMv2_4317_179_8 7899 9044 + 3.B.1.1.3
TC HRGMv2_4317_179 HRGMv2_4317_179_9 9104 10516 + 3.B.1.1.6
CAZyme HRGMv2_4317_179 HRGMv2_4317_179_10 10760 12205 + GH73
Gene ID: HRGMv2_4317_179_2
Type: CAZyme
Location: 619 - 1578 (+)
Gene ID: HRGMv2_4317_179_3
Type: pfam
Location: 1562 - 3556 (+)
Gene ID: HRGMv2_4317_179_4
Type: peptidase
Location: 3583 - 4887 (+)
Gene ID: HRGMv2_4317_179_5
Type: TC
Location: 5104 - 6540 (+)
Gene ID: HRGMv2_4317_179_6
Type: pfam
Location: 6558 - 7379 (+)
Gene ID: HRGMv2_4317_179_7
Type: TC
Location: 7435 - 7851 (+)
Gene ID: HRGMv2_4317_179_8
Type: TC
Location: 7899 - 9044 (+)
Gene ID: HRGMv2_4317_179_9
Type: TC
Location: 9104 - 10516 (+)
Gene ID: HRGMv2_4317_179_10
Type: CAZyme
Location: 10760 - 12205 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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