Cluster: HRGMv2_4317_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_75 | HRGMv2_4317_75_17 | 16985 | 18382 | + | 4.A.1.2.6 |
| TC | HRGMv2_4317_75 | HRGMv2_4317_75_18 | 18390 | 18905 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4317_75 | HRGMv2_4317_75_19 | 18902 | 20344 | + | GH1 |
Gene ID: HRGMv2_4317_75_17
Type: TC
Location: 16985 - 18382 (+)
Type: TC
Location: 16985 - 18382 (+)
Gene ID: HRGMv2_4317_75_18
Type: TC
Location: 18390 - 18905 (+)
Type: TC
Location: 18390 - 18905 (+)
Gene ID: HRGMv2_4317_75_19
Type: CAZyme
Location: 18902 - 20344 (+)
Type: CAZyme
Location: 18902 - 20344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.