Cluster: HRGMv2_4317_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00674
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_240 | HRGMv2_4317_240_3 | 780 | 2597 | - | GH13_31 |
| CAZyme | HRGMv2_4317_240 | HRGMv2_4317_240_4 | 2616 | 5024 | - | GH31_15 |
| TC | HRGMv2_4317_240 | HRGMv2_4317_240_5 | 5114 | 5935 | - | 3.A.1.1.34 |
| TC | HRGMv2_4317_240 | HRGMv2_4317_240_6 | 5948 | 6826 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_4317_240_3
Type: CAZyme
Location: 780 - 2597 (-)
Type: CAZyme
Location: 780 - 2597 (-)
Gene ID: HRGMv2_4317_240_4
Type: CAZyme
Location: 2616 - 5024 (-)
Type: CAZyme
Location: 2616 - 5024 (-)
Gene ID: HRGMv2_4317_240_5
Type: TC
Location: 5114 - 5935 (-)
Type: TC
Location: 5114 - 5935 (-)
Gene ID: HRGMv2_4317_240_6
Type: TC
Location: 5948 - 6826 (-)
Type: TC
Location: 5948 - 6826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.