Cluster: HRGMv2_4317_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_45 | HRGMv2_4317_45_7 | 9400 | 10431 | + | GH179 |
| TC | HRGMv2_4317_45 | HRGMv2_4317_45_8 | 10442 | 11413 | + | 3.A.1.1.10 |
| TC | HRGMv2_4317_45 | HRGMv2_4317_45_9 | 11427 | 12338 | + | 3.A.1.1.9 |
Gene ID: HRGMv2_4317_45_7
Type: CAZyme
Location: 9400 - 10431 (+)
Type: CAZyme
Location: 9400 - 10431 (+)
Gene ID: HRGMv2_4317_45_8
Type: TC
Location: 10442 - 11413 (+)
Type: TC
Location: 10442 - 11413 (+)
Gene ID: HRGMv2_4317_45_9
Type: TC
Location: 11427 - 12338 (+)
Type: TC
Location: 11427 - 12338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.