Cluster: HRGMv2_4317_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00259
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_198 | HRGMv2_4317_198_7 | 5089 | 6219 | - | PL38 |
| STP | HRGMv2_4317_198 | HRGMv2_4317_198_8 | 6459 | 8765 | + | HTH_18 |
| TC | HRGMv2_4317_198 | HRGMv2_4317_198_9 | 9004 | 10674 | + | 3.A.1.1.10 |
| TC | HRGMv2_4317_198 | HRGMv2_4317_198_10 | 10776 | 11693 | + | 3.A.1.1.10 |
| TC | HRGMv2_4317_198 | HRGMv2_4317_198_11 | 11734 | 12639 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_4317_198 | HRGMv2_4317_198_12 | 12818 | 13930 | + | GH88 |
Gene ID: HRGMv2_4317_198_7
Type: CAZyme
Location: 5089 - 6219 (-)
Type: CAZyme
Location: 5089 - 6219 (-)
Gene ID: HRGMv2_4317_198_8
Type: STP
Location: 6459 - 8765 (+)
Type: STP
Location: 6459 - 8765 (+)
Gene ID: HRGMv2_4317_198_9
Type: TC
Location: 9004 - 10674 (+)
Type: TC
Location: 9004 - 10674 (+)
Gene ID: HRGMv2_4317_198_10
Type: TC
Location: 10776 - 11693 (+)
Type: TC
Location: 10776 - 11693 (+)
Gene ID: HRGMv2_4317_198_11
Type: TC
Location: 11734 - 12639 (+)
Type: TC
Location: 11734 - 12639 (+)
Gene ID: HRGMv2_4317_198_12
Type: CAZyme
Location: 12818 - 13930 (+)
Type: CAZyme
Location: 12818 - 13930 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.