Cluster: HRGMv2_4317_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00157
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_135 | HRGMv2_4317_135_66 | 68325 | 69626 | - | 2.A.56.1.5 |
| pfam | HRGMv2_4317_135 | HRGMv2_4317_135_67 | 69642 | 70130 | - | DctQ |
| TC | HRGMv2_4317_135 | HRGMv2_4317_135_68 | 70256 | 71278 | - | 2.A.56.1.5 |
| CAZyme | HRGMv2_4317_135 | HRGMv2_4317_135_69 | 71390 | 73891 | - | GH31_2 |
Gene ID: HRGMv2_4317_135_66
Type: TC
Location: 68325 - 69626 (-)
Type: TC
Location: 68325 - 69626 (-)
Gene ID: HRGMv2_4317_135_67
Type: pfam
Location: 69642 - 70130 (-)
Type: pfam
Location: 69642 - 70130 (-)
Gene ID: HRGMv2_4317_135_68
Type: TC
Location: 70256 - 71278 (-)
Type: TC
Location: 70256 - 71278 (-)
Gene ID: HRGMv2_4317_135_69
Type: CAZyme
Location: 71390 - 73891 (-)
Type: CAZyme
Location: 71390 - 73891 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.