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Cluster: HRGMv2_4317_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4317_100 HRGMv2_4317_100_1 2 397 + 9.A.40.1.2
CAZyme HRGMv2_4317_100 HRGMv2_4317_100_2 548 3250 - GH28
NULL(UNKNOWN) HRGMv2_4317_100 HRGMv2_4317_100_3 3391 5916 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4317_100 HRGMv2_4317_100_4 5977 6843 - 3.A.1.1.39
TC HRGMv2_4317_100 HRGMv2_4317_100_5 6858 7772 - 3.A.1.1.11
STP HRGMv2_4317_100 HRGMv2_4317_100_6 7875 9308 - SBP_bac_1
TF HRGMv2_4317_100 HRGMv2_4317_100_7 9618 11222 + HTH_AraC
TC HRGMv2_4317_100 HRGMv2_4317_100_8 11250 13058 + 8.A.59.2.1
Gene ID: HRGMv2_4317_100_1
Type: TC
Location: 2 - 397 (+)
Gene ID: HRGMv2_4317_100_2
Type: CAZyme
Location: 548 - 3250 (-)
Gene ID: HRGMv2_4317_100_3
Type:
Location: 3391 - 5916 (-)
Gene ID: HRGMv2_4317_100_4
Type: TC
Location: 5977 - 6843 (-)
Gene ID: HRGMv2_4317_100_5
Type: TC
Location: 6858 - 7772 (-)
Gene ID: HRGMv2_4317_100_6
Type: STP
Location: 7875 - 9308 (-)
Gene ID: HRGMv2_4317_100_7
Type: TF
Location: 9618 - 11222 (+)
Gene ID: HRGMv2_4317_100_8
Type: TC
Location: 11250 - 13058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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