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Cluster: HRGMv2_4317_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_2 838 1773 - GT2
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_3 1884 2834 - GT2
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_4 2831 4036 - GT2
TC HRGMv2_4317_167 HRGMv2_4317_167_5 4169 4696 - 3.A.1.103.1
NULL(UNKNOWN) HRGMv2_4317_167 HRGMv2_4317_167_6 4641 4928 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4317_167 HRGMv2_4317_167_7 4969 5757 - 3.A.1.103.4
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_8 5754 7598 - GT2
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_9 7619 8602 - GT2
TC HRGMv2_4317_167 HRGMv2_4317_167_10 8662 10152 - 9.B.18.1.3
CAZyme HRGMv2_4317_167 HRGMv2_4317_167_11 10155 11021 - GT2
Gene ID: HRGMv2_4317_167_2
Type: CAZyme
Location: 838 - 1773 (-)
Gene ID: HRGMv2_4317_167_3
Type: CAZyme
Location: 1884 - 2834 (-)
Gene ID: HRGMv2_4317_167_4
Type: CAZyme
Location: 2831 - 4036 (-)
Gene ID: HRGMv2_4317_167_5
Type: TC
Location: 4169 - 4696 (-)
Gene ID: HRGMv2_4317_167_6
Type:
Location: 4641 - 4928 (-)
Gene ID: HRGMv2_4317_167_7
Type: TC
Location: 4969 - 5757 (-)
Gene ID: HRGMv2_4317_167_8
Type: CAZyme
Location: 5754 - 7598 (-)
Gene ID: HRGMv2_4317_167_9
Type: CAZyme
Location: 7619 - 8602 (-)
Gene ID: HRGMv2_4317_167_10
Type: TC
Location: 8662 - 10152 (-)
Gene ID: HRGMv2_4317_167_11
Type: CAZyme
Location: 10155 - 11021 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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