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Cluster: HRGMv2_4317_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4317_212 HRGMv2_4317_212_3 2122 4113 + 9.B.18.2.1
STP HRGMv2_4317_212 HRGMv2_4317_212_4 4110 5318 + Aminotran_1_2
NULL(UNKNOWN) HRGMv2_4317_212 HRGMv2_4317_212_5 5318 5410 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4317_212 HRGMv2_4317_212_6 5458 6144 + 9.B.18.1.3
CAZyme HRGMv2_4317_212 HRGMv2_4317_212_7 6203 7309 + GT2
pfam HRGMv2_4317_212 HRGMv2_4317_212_8 7306 8220 + LicD
CAZyme HRGMv2_4317_212 HRGMv2_4317_212_9 8217 9629 + GT4
pfam HRGMv2_4317_212 HRGMv2_4317_212_10 9642 10199 + Hexapep | Hexapep_2 | Hexapep_2
NULL(UNKNOWN) HRGMv2_4317_212 HRGMv2_4317_212_11 10375 12015 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4317_212 HRGMv2_4317_212_12 12018 13538 + 9.B.67.3.2
Gene ID: HRGMv2_4317_212_3
Type: TC
Location: 2122 - 4113 (+)
Gene ID: HRGMv2_4317_212_4
Type: STP
Location: 4110 - 5318 (+)
Gene ID: HRGMv2_4317_212_5
Type:
Location: 5318 - 5410 (+)
Gene ID: HRGMv2_4317_212_6
Type: TC
Location: 5458 - 6144 (+)
Gene ID: HRGMv2_4317_212_7
Type: CAZyme
Location: 6203 - 7309 (+)
Gene ID: HRGMv2_4317_212_8
Type: pfam
Location: 7306 - 8220 (+)
Gene ID: HRGMv2_4317_212_9
Type: CAZyme
Location: 8217 - 9629 (+)
Gene ID: HRGMv2_4317_212_10
Type: pfam
Location: 9642 - 10199 (+)
Gene ID: HRGMv2_4317_212_11
Type:
Location: 10375 - 12015 (+)
Gene ID: HRGMv2_4317_212_12
Type: TC
Location: 12018 - 13538 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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