Cluster: HRGMv2_4317_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00057
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_95 | HRGMv2_4317_95_4 | 2924 | 4801 | + | 1.A.33.1.4 |
| pfam | HRGMv2_4317_95 | HRGMv2_4317_95_5 | 5042 | 6184 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| CAZyme | HRGMv2_4317_95 | HRGMv2_4317_95_6 | 6371 | 7852 | + | GH106 |
Gene ID: HRGMv2_4317_95_4
Type: TC
Location: 2924 - 4801 (+)
Type: TC
Location: 2924 - 4801 (+)
Gene ID: HRGMv2_4317_95_5
Type: pfam
Location: 5042 - 6184 (+)
Type: pfam
Location: 5042 - 6184 (+)
Gene ID: HRGMv2_4317_95_6
Type: CAZyme
Location: 6371 - 7852 (+)
Type: CAZyme
Location: 6371 - 7852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.