Cluster: HRGMv2_4317_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00285
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_195 | HRGMv2_4317_195_13 | 13402 | 14340 | + | 3.A.1.1.10 |
| TC | HRGMv2_4317_195 | HRGMv2_4317_195_14 | 14369 | 15256 | + | 3.A.1.1.29 |
| TF | HRGMv2_4317_195 | HRGMv2_4317_195_15 | 15344 | 17554 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4317_195 | HRGMv2_4317_195_16 | 17600 | 18889 | + | GH109 |
Gene ID: HRGMv2_4317_195_13
Type: TC
Location: 13402 - 14340 (+)
Type: TC
Location: 13402 - 14340 (+)
Gene ID: HRGMv2_4317_195_14
Type: TC
Location: 14369 - 15256 (+)
Type: TC
Location: 14369 - 15256 (+)
Gene ID: HRGMv2_4317_195_15
Type: TF
Location: 15344 - 17554 (+)
Type: TF
Location: 15344 - 17554 (+)
Gene ID: HRGMv2_4317_195_16
Type: CAZyme
Location: 17600 - 18889 (+)
Type: CAZyme
Location: 17600 - 18889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.