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Cluster: HRGMv2_4317_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4317_259 HRGMv2_4317_259_1 3 590 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_4317_259 HRGMv2_4317_259_2 577 789 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4317_259 HRGMv2_4317_259_3 834 2384 + SBP_bac_1
TC HRGMv2_4317_259 HRGMv2_4317_259_4 2472 4163 + 8.A.59.2.1
TF HRGMv2_4317_259 HRGMv2_4317_259_5 4163 4894 + HTH_AraC
CAZyme HRGMv2_4317_259 HRGMv2_4317_259_6 4891 7032 + PL11
CAZyme HRGMv2_4317_259 HRGMv2_4317_259_7 7029 9245 + GH3
CAZyme HRGMv2_4317_259 HRGMv2_4317_259_8 9282 10697 + GH4
Gene ID: HRGMv2_4317_259_1
Type: TC
Location: 3 - 590 (+)
Gene ID: HRGMv2_4317_259_2
Type:
Location: 577 - 789 (+)
Gene ID: HRGMv2_4317_259_3
Type: STP
Location: 834 - 2384 (+)
Gene ID: HRGMv2_4317_259_4
Type: TC
Location: 2472 - 4163 (+)
Gene ID: HRGMv2_4317_259_5
Type: TF
Location: 4163 - 4894 (+)
Gene ID: HRGMv2_4317_259_6
Type: CAZyme
Location: 4891 - 7032 (+)
Gene ID: HRGMv2_4317_259_7
Type: CAZyme
Location: 7029 - 9245 (+)
Gene ID: HRGMv2_4317_259_8
Type: CAZyme
Location: 9282 - 10697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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