Cluster: HRGMv2_4317_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00972
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_178 | HRGMv2_4317_178_16 | 16814 | 18313 | + | 3.A.1.103.6 |
| pfam | HRGMv2_4317_178 | HRGMv2_4317_178_17 | 18310 | 19182 | + | Methyltransf_25 |
| CAZyme | HRGMv2_4317_178 | HRGMv2_4317_178_18 | 19179 | 22310 | + | GT27 |
Gene ID: HRGMv2_4317_178_16
Type: TC
Location: 16814 - 18313 (+)
Type: TC
Location: 16814 - 18313 (+)
Gene ID: HRGMv2_4317_178_17
Type: pfam
Location: 18310 - 19182 (+)
Type: pfam
Location: 18310 - 19182 (+)
Gene ID: HRGMv2_4317_178_18
Type: CAZyme
Location: 19179 - 22310 (+)
Type: CAZyme
Location: 19179 - 22310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.