Cluster: HRGMv2_4317_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_00682
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_231 | HRGMv2_4317_231_8 | 6454 | 8322 | + | GH154 |
| CAZyme | HRGMv2_4317_231 | HRGMv2_4317_231_9 | 8402 | 9535 | + | GH88 |
| STP | HRGMv2_4317_231 | HRGMv2_4317_231_10 | 9622 | 10959 | + | SBP_bac_1 |
| TC | HRGMv2_4317_231 | HRGMv2_4317_231_11 | 11032 | 11925 | + | 3.A.1.1.20 |
| TC | HRGMv2_4317_231 | HRGMv2_4317_231_12 | 11941 | 12780 | + | 3.A.1.1.34 |
Gene ID: HRGMv2_4317_231_8
Type: CAZyme
Location: 6454 - 8322 (+)
Type: CAZyme
Location: 6454 - 8322 (+)
Gene ID: HRGMv2_4317_231_9
Type: CAZyme
Location: 8402 - 9535 (+)
Type: CAZyme
Location: 8402 - 9535 (+)
Gene ID: HRGMv2_4317_231_10
Type: STP
Location: 9622 - 10959 (+)
Type: STP
Location: 9622 - 10959 (+)
Gene ID: HRGMv2_4317_231_11
Type: TC
Location: 11032 - 11925 (+)
Type: TC
Location: 11032 - 11925 (+)
Gene ID: HRGMv2_4317_231_12
Type: TC
Location: 11941 - 12780 (+)
Type: TC
Location: 11941 - 12780 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.