y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011895m |
Family | CBM43 |
Protein Properties | Length: 476 Molecular Weight: 50717.7 Isoelectric Point: 4.9829 |
Chromosome | Chromosome/Scaffold: 00049 Start: 262457 End: 264096 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 384 | 463 | 1.4e-33 |
WCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPSK | |||
GH17 | 26 | 344 | 0 |
VGINYGRVANNLPSPEKVVELLKSQRIDRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPK NTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPG QVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVGDENEAGAGAANAAAYNGNLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKPGPT SERNYGLFYPNEQTVYDSP |
Full Sequence |
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Protein Sequence Length: 476 Download |
MATLAAFSSF FFFFLVTFAF ADTGKVGINY GRVANNLPSP EKVVELLKSQ RIDRVKTYDT 60 DSAVLAALAN SDISVVVAFP NEELSKAAAD QSFTDNWVQA NISKYYPATK IEAVAVGNEV 120 FADPKNTTPF LVPAMKNVYN SLVKYKLDSN VKVSSPIALG ALQNSYPPSS GSFKSDLIEP 180 ALKPMLEFLR KTSSYLMVNA YPFFAYSANA DKISLDYALF RDNPGQVDSG NGLKYTNLFD 240 AQLDAVFAAM SAISYNDVKV VVTETGWPSV GDENEAGAGA ANAAAYNGNL VRRVLSGSGT 300 PLRPKDPLNV YLFALFNENQ KPGPTSERNY GLFYPNEQTV YDSPFVSTSG NSSSTPAANK 360 SKTQVPVSGG GGGDVSPSAA GQTWCVANAN AGEKKLQAAI DYACGEGGAD CRPIQEGATC 420 YDPNTLEAHA SYAFNSYYQK QVRKAGSCDF GGAAYVVTQA PSKYPIPSPN SNLLC* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-25 | 383 | 455 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-38 | 383 | 462 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-101 | 26 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08587.1 | 0 | 16 | 466 | 17 | 454 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_001154780.1 | 0 | 16 | 463 | 17 | 451 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 16 | 461 | 17 | 449 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002316783.1 | 0 | 24 | 461 | 2 | 438 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 23 | 461 | 28 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 25 | 345 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 25 | 345 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |