y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004376m |
Family | CBM43 |
Protein Properties | Length: 390 Molecular Weight: 43144.3 Isoelectric Point: 8.4033 |
Chromosome | Chromosome/Scaffold: 6 Start: 565755 End: 567086 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 302 | 384 | 5.4e-33 |
WCVAKPSVAAETLQQSLDFACGQGGANCDEIKPQGICFYPDTVMAHASYAFNSYWQKTKRSGGTCSFGGTAMLIATDPSYQHC |
Full Sequence |
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Protein Sequence Length: 390 Download |
MRHLLYIFFL IPFLCFAGAG QESTPIEALN LHQRVLQLRQ TADLDLAVSV SDNRTITEIS 60 SSIIEAETWL KNHVLSRYPS TKITTIVISP PDSCQTTQHK PSFDLLLSSL KNLYHSLTRW 120 GLEQNIKVSS GFSYQCFNKP ETLKYLEMFK PIFVFIKSIN STFTINPPLN FLSSPDNHLD 180 LLRSVEKFGS LRFNKVNILN PEPEEATTTT TRRNLRSLID FSRKITVNFP TLPSPSPESS 240 PIHSSIGSPL RNPKPPVSSP PQYSPEKSPS PLSSPGLSLP PCIRTPAPSP SPVNKKDVEG 300 LWCVAKPSVA AETLQQSLDF ACGQGGANCD EIKPQGICFY PDTVMAHASY AFNSYWQKTK 360 RSGGTCSFGG TAMLIATDPS YQHCRFDLT* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-24 | 301 | 373 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-40 | 301 | 386 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22745.1 | 0 | 185 | 389 | 1 | 206 | unknown [Glycine max] |
EMBL | CBI33700.1 | 0 | 7 | 386 | 11 | 354 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 1 | 389 | 1 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 7 | 386 | 11 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 18 | 385 | 21 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-20 | 285 | 386 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |