y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000166019 |
Family | CBM43 |
Protein Properties | Length: 325 Molecular Weight: 35072.7 Isoelectric Point: 8.6886 |
Chromosome | Chromosome/Scaffold: 002827334 Start: 2720 End: 5111 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 216 | 295 | 1.1e-30 |
WCVVKPTVPDPIIQEALDYACGSGADCKSIRPNGSCYQPDTLLSHASYAFNSYWQNTKIAGGTCDXGGTAMLVTVDPINC |
Full Sequence |
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Protein Sequence Length: 325 Download |
MGILSLTTSK SCMQFFCSQL QYGVCLWPFS LRAFVVTLAN KNSLVSGSMM SMNQEFGSAG 60 ARSFAQFFKP QDTKLHKSKS IHELEKNKLK AINHLDLHFA LASPNIEFQP FDASSPFSSP 120 PLDSPAPGHL PLPAPNSVSP PIPPNPPLAN PPPSGPTSSP IPSPPQNGPS PHPPTTIPTP 180 PKSVLSPPVL PPPIXFPPPS GPPSPPQKKP PQFAVWCVVK PTVPDPIIQE ALDYACGSGA 240 DCKSIRPNGS CYQPDTLLSH ASYAFNSYWQ NTKIAGGTCD XGGTAMLVTV DPINCKLFLY 300 SMTGKLDAEN ACYRHRYRMR NHDKN 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-22 | 216 | 286 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-35 | 216 | 292 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 4.2039e-45 | 61 | 292 | 32 | 252 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 2.8026e-45 | 61 | 292 | 23 | 243 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 9.80909e-45 | 61 | 308 | 32 | 268 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 5e-38 | 211 | 294 | 210 | 293 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520569.1 | 5.60519e-45 | 121 | 297 | 67 | 246 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000000004 | 206 | 292 | 3 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO982195 | 79 | 214 | 292 | 1.00053e-42 |
FG856541 | 79 | 214 | 292 | 3.00018e-42 |
EG679312 | 104 | 214 | 317 | 6.00036e-42 |
FS982989 | 79 | 214 | 292 | 2e-40 |
EG665507 | 79 | 214 | 292 | 7e-40 |
Sequence Alignments (This image is cropped. Click for full image.) |
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