y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01031317001 |
Family | CBM43 |
Protein Properties | Length: 616 Molecular Weight: 65037.7 Isoelectric Point: 7.3258 |
Chromosome | Chromosome/Scaffold: 14 Start: 413352 End: 416102 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 435 | 516 | 7.5e-35 |
WCVAKTGAMESALQAALDYACGIGGADCSTIQQGASCYNPNTLQSHASYAFNSYYQKNPTASSCDFGGTAMIVNINPSTGSC |
Full Sequence |
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Protein Sequence Length: 616 Download |
MAGEASKCLL FLLLLSVLAF YSSATLVGFS YDARRSRGAS SATKTVSFLK QNKVSASQIR 60 VFVADHKVLN SLFNTGVSVD LYLNETRVES LRDSTPSSIS WLKTHLLTFL PHVNIQSVIA 120 SSVSSELPGK NELPRVLSTL ISTHSILSSF HLSSEVKVTV AFSLKFLENL DGKHERDLRR 180 IFHFIKKTRS FVIVEARVDG ELSMGDQFVQ AMIKRATHAN AVLPCSDVPM MLTVKSPAAP 240 SGIEVAAFTD KISKSLENNT QIIGKISGLY AEVSDMEEFN QKELKREEEQ LFPSSRRELL 300 NNFHLKTTLH DAFDPPTTTF PTNPVTIPLD NPTPTIVTVP STSPVTITPP NPDATPVTVP 360 STTPITIPPT NPLNSPVPVT SPVTTPITVP GAQPITNPVT TYPAPSGNIP TTTPFTSPVM 420 PPATPNSPAA VGQSWCVAKT GAMESALQAA LDYACGIGGA DCSTIQQGAS CYNPNTLQSH 480 ASYAFNSYYQ KNPTASSCDF GGTAMIVNIN PSTGSCVFLS SSSSSSSSSP TPSLPTITSP 540 TTTSSSSWPA ISGSGTPPTM LNTSNPASAT TTGYGSGSPQ GASSSVSASA AHLQPFIGNI 600 ILVTSFITAK ITLDI* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-24 | 434 | 505 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-43 | 434 | 518 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65737.1 | 0 | 134 | 615 | 38 | 519 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 1 | 615 | 1 | 615 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 1 | 615 | 1 | 615 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002463588.1 | 0 | 68 | 529 | 18 | 526 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
RefSeq | XP_002512573.1 | 0 | 204 | 615 | 1 | 406 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-18 | 423 | 523 | 1 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.00005 | 43 | 161 | 16 | 130 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0.001 | 59 | 122 | 30 | 93 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0.001 | 59 | 122 | 30 | 93 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |