y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g079530.1 |
Family | CBM43 |
Protein Properties | Length: 275 Molecular Weight: 29532.9 Isoelectric Point: 4.9282 |
Chromosome | Chromosome/Scaffold: 4 Start: 26393250 End: 26396678 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 37 | 115 | 1e-29 |
WCVAKNNAEDAALQTALDWACGAGGADCGPIQNGGPCYDVNSVQNTASYAFNDYFLKHGLTDDSCSFNNNAAVTSLNPS |
Full Sequence |
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Protein Sequence Length: 275 Download |
MPTIKSFVFS DSLLLLLLLS PFCHGGSDGG AVKQELWCVA KNNAEDAALQ TALDWACGAG 60 GADCGPIQNG GPCYDVNSVQ NTASYAFNDY FLKHGLTDDS CSFNNNAAVT SLNPSEFVFV 120 YLSMVQFGFV LDLGYLEIGM HAMLLLWMTK NCVFEGYGNC KFPSGMSVSN GSLIGSTPSP 180 IGLGPGENMS GCSKASLGWW FWLLGIGHLL LMVSVSEWQE KRDFLVFVQA AQTNLKKIYA 240 WFSKAWVDCK NVGSGSSPAV LSPVSILRQS QPLI* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-9 | 36 | 107 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-20 | 36 | 115 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB68148.1 | 1e-38 | 29 | 213 | 109 | 250 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 9e-39 | 29 | 213 | 33 | 174 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 30 | 213 | 29 | 170 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 2e-38 | 1 | 173 | 1 | 131 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525141.1 | 4.99997e-41 | 33 | 194 | 29 | 151 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000002 | 37 | 115 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |