y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os02g29980.1 |
Family | CBM43 |
Protein Properties | Length: 190 Molecular Weight: 19309.9 Isoelectric Point: 8.2772 |
Chromosome | Chromosome/Scaffold: 2 Start: 17813447 End: 17819174 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 34 | 117 | 2.2e-32 |
WCIARSGAAERTVQAALDYACGPAGGADCAPIQASGLCYLPNTLAAHASYAFNSVFQRARAAPGACDFAGTATITLTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 190 Download |
MLWRALWWWR RWVAVAGAVA WLLAAAVRPA GAAWCIARSG AAERTVQAAL DYACGPAGGA 60 DCAPIQASGL CYLPNTLAAH ASYAFNSVFQ RARAAPGACD FAGTATITLT DPSYGSCTYP 120 ASPSTAGQSG STGGIPSPPA ADGGGLSPPD LGSSDDSGAA ARSRLAAAPF LPRLALSCLL 180 VYLLHTQRW* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-8 | 35 | 106 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-25 | 35 | 119 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN33807.1 | 7.00649e-45 | 19 | 113 | 15 | 109 | unknown [Zea mays] |
DDBJ | BAD23212.1 | 0 | 32 | 113 | 32 | 113 | glycosyl hydrolase-like [Oryza sativa Japonica Group] |
DDBJ | BAH91705.1 | 0 | 32 | 189 | 32 | 189 | Os02g0503300 [Oryza sativa Japonica Group] |
RefSeq | NP_001148424.1 | 0 | 19 | 185 | 15 | 185 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | XP_002452133.1 | 0 | 28 | 185 | 32 | 190 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-21 | 30 | 121 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |