y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_136.19 |
Family | CBM43 |
Protein Properties | Length: 166 Molecular Weight: 18747.1 Isoelectric Point: 4.9848 |
Chromosome | Chromosome/Scaffold: 136 Start: 228119 End: 229424 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 25 | 103 | 3.8e-32 |
WCIADEQTLDDELQAALDWACGKGGADCSKIQLNQPCFFPNTLRDHASYAFNNYYQKFKHRGGSCSFRGAAMITELDPK |
Full Sequence |
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Protein Sequence Length: 166 Download |
MLRIMLALLI LSRIPHESDG QFEQWCIADE QTLDDELQAA LDWACGKGGA DCSKIQLNQP 60 CFFPNTLRDH ASYAFNNYYQ KFKHRGGSCS FRGAAMITEL DPKGVSESHV PCEDAMTLAT 120 MSVFPDSEAN HNDEHQRVND FFFDSTKCSQ IQYFLLECKS KAYKN* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-19 | 24 | 96 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-33 | 24 | 102 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92842.1 | 0 | 4 | 102 | 10 | 108 | unknown [Populus trichocarpa] |
EMBL | CAN67352.1 | 0 | 17 | 110 | 21 | 116 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307902.1 | 0 | 4 | 102 | 9 | 107 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321180.1 | 0 | 3 | 113 | 7 | 112 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531703.1 | 0 | 2 | 109 | 6 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000000007 | 14 | 103 | 2 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV271912 | 111 | 3 | 113 | 0 |
CV230089 | 111 | 3 | 113 | 0 |
DT469658 | 111 | 3 | 113 | 0 |
BQ624534 | 138 | 1 | 138 | 0 |
EY745025 | 138 | 1 | 138 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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