y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10007342 |
Family | CBM43 |
Protein Properties | Length: 273 Molecular Weight: 27900.3 Isoelectric Point: 8.1912 |
Chromosome | Chromosome/Scaffold: 302 Start: 74524 End: 76718 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 112 | 194 | 5e-35 |
WCVASQGASTKALQVALDYACGYGGADCGGIQPAGSCYNPNTIRDHASYAFNNYYQKNPLPTSCNFGGTAVITSTNPSTGTCK |
Full Sequence |
---|
Protein Sequence Length: 273 Download |
MGIGRALMCC LIIFFSAPPT LSLSAGRSRI STIPSAKQEK TVPDFRISRK DITAPITTVP 60 IITPATTANP VPPSDTSIIN PNSDPDSSAP TITPTAAGAT SSSSASLPGA SWCVASQGAS 120 TKALQVALDY ACGYGGADCG GIQPAGSCYN PNTIRDHASY AFNNYYQKNP LPTSCNFGGT 180 AVITSTNPST GTCKLPSTST SSSVLNTTNS NGATVFGAVP TGPASPFSTS SSSLSSSSNQ 240 RYLVVLSAIG PLMYGLLLTV RVNRLEEHDY VV* 300 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-11 | 112 | 182 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-29 | 112 | 194 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 1.4013e-45 | 49 | 208 | 53 | 205 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 5.60519e-45 | 49 | 208 | 53 | 205 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 0 | 83 | 256 | 53 | 226 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 112 | 217 | 99 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 0 | 36 | 208 | 25 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-20 | 90 | 199 | 3 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |