y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G119500.3 |
Family | CBM43 |
Protein Properties | Length: 177 Molecular Weight: 19041.6 Isoelectric Point: 5.7518 |
Chromosome | Chromosome/Scaffold: 13 Start: 13264405 End: 13266210 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 36 | 119 | 2.3e-30 |
WCVAKNNAADQALQEAINWACGQGGANCGPIQQGGACYDSNDIQRTASWAFNDYYLKNGLTDDACYFSNTAALTSLNPSFDKCK |
Full Sequence |
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Protein Sequence Length: 177 Download |
MSKLCSFSMF VLVLLVALSL PKCLMGQRGV APRDLWCVAK NNAADQALQE AINWACGQGG 60 ANCGPIQQGG ACYDSNDIQR TASWAFNDYY LKNGLTDDAC YFSNTAALTS LNPSFDKCKF 120 PSSLSVNNGS IYASTGTIQM GPDNADLSSS SNRVGGTWFL PLFTSYLFVV FTWLIH* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-18 | 35 | 106 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-33 | 35 | 120 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92983.1 | 0 | 1 | 114 | 1 | 114 | unknown [Populus trichocarpa] |
RefSeq | XP_002279275.1 | 0 | 27 | 175 | 27 | 174 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 0 | 1 | 150 | 1 | 150 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327206.1 | 0 | 34 | 155 | 1 | 122 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525141.1 | 0 | 30 | 155 | 27 | 154 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-19 | 36 | 122 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |