y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g21510.1 |
Family | CBM43 |
Protein Properties | Length: 330 Molecular Weight: 33652.9 Isoelectric Point: 4.4681 |
Chromosome | Chromosome/Scaffold: 5 Start: 24117232 End: 24118590 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 243 | 324 | 1.9e-33 |
WCVAKPTVPDPILQEAMDYACGSGAECRPIQPAGACSRPDTVLAHASFAFNSYWQMTRAAGGTCDFGGTATIVTSDPSYDRC |
Full Sequence |
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Protein Sequence Length: 330 Download |
MAAPKRRSIF RRLVVPPPPP LFFFFLLFLI GVITDRCEAR ALRQSKRSSL MMDALYKLNF 60 IRTVEPAYLP PPPAAVDANA SSEDAADAAS LAGSPFCVNP PNAPPSSTTP PFTSTSPSTT 120 TPSVPDDGQL PPPLPPITPT PPPSFGEPSP PSGTGFGSGT PGSSPSPGPG PPSESNPPLF 180 GPSTPGTAPP SPIEVVPSPP DDQSGPGSGS GSGSGSGTGG FMPPIIYPPP LAPPTAPAEQ 240 SLWCVAKPTV PDPILQEAMD YACGSGAECR PIQPAGACSR PDTVLAHASF AFNSYWQMTR 300 AAGGTCDFGG TATIVTSDPS YDRCAFTLV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-24 | 242 | 313 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 242 | 326 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF80478.2 | 0.000000002 | 51 | 152 | 49 | 129 | unknown [Zea mays] |
GenBank | ACF80478.2 | 4.00001e-41 | 240 | 329 | 292 | 381 | unknown [Zea mays] |
GenBank | EAZ31955.1 | 4e-16 | 23 | 201 | 13 | 170 | hypothetical protein OsJ_16128 [Oryza sativa Japonica Group] |
GenBank | EAZ31955.1 | 9.99967e-42 | 221 | 320 | 378 | 478 | hypothetical protein OsJ_16128 [Oryza sativa Japonica Group] |
RefSeq | NP_001053843.1 | 0 | 221 | 329 | 222 | 329 | Os04g0612100 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-20 | 243 | 326 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |