y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G09460.1 |
Family | CBM43 |
Protein Properties | Length: 331 Molecular Weight: 33991.2 Isoelectric Point: 6.6961 |
Chromosome | Chromosome/Scaffold: 1 Start: 3053901 End: 3055360 |
Description | glucan endo-1,3-beta-glucosidase-related, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 137 | 216 | 5.9e-34 |
WCVAKPGASQVSLQQALDYACGIADCSQLQQGGNCYSPISLQSHASFAFNSYYQKNPSPQSCDFGGAASLVNTNPSTGSC |
Full Sequence |
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Protein Sequence Length: 331 Download |
MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA 60 TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN PVTQYPPTQP SGTVPVPVPV 120 VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH 180 ASFAFNSYYQ KNPSPQSCDF GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ 240 TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN 300 NPTSSDSTHL KIHFGHAMVA TLILHAVLFH * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-19 | 137 | 205 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-33 | 137 | 218 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0012505 | endomembrane system |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC33206.1 | 0 | 1 | 212 | 1 | 212 | Unknown protein [Arabidopsis thaliana] |
RefSeq | NP_172417.2 | 0 | 1 | 330 | 1 | 330 | glucan endo-1,3-beta-glucosidase-related [Arabidopsis thaliana] |
RefSeq | XP_002276666.1 | 0 | 51 | 217 | 344 | 517 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 23 | 321 | 297 | 604 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 3 | 328 | 81 | 402 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 129 | 223 | 6 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |