y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000149001 |
Family | CBM43 |
Protein Properties | Length: 297 Molecular Weight: 31863.9 Isoelectric Point: 6.7588 |
Chromosome | Chromosome/Scaffold: 010040291 Start: 3008 End: 4563 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 210 | 292 | 4.2e-35 |
WCVANPAVPDPIVQEALDYACGSGADCKSIQPSGSCYKPDTLLSHASYAFNSYWQKTKAAGGTCDFGGTAMLVTVDPSFDGCK |
Full Sequence |
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Protein Sequence Length: 297 Download |
MTXLSXIFQT GFLSVLEFTM YCMRLSIIPI FYISISITTF SILCDARSFA QFFKPHDTKL 60 HKSNSIHELE KYKLKAIYHL DLQFPLPSPN IEFTPFDASS PSPSSSPPLD SPAPGNLPLP 120 DPYSVLPPIP STPPLTNPPS SGPTSSPIPN PPQNGPSPYP PTTTPIPPEN SPIPPKSIPT 180 QPISLPPIAF PPPSGPPSPP HKKPPQSAAW CVANPAVPDP IVQEALDYAC GSGADCKSIQ 240 PSGSCYKPDT LLSHASYAFN SYWQKTKAAG GTCDFGGTAM LVTVDPSFDG CKFFYKG 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-24 | 210 | 280 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-42 | 210 | 293 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 25 | 296 | 11 | 262 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 25 | 296 | 2 | 253 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 0 | 25 | 296 | 11 | 263 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516415.1 | 7.9874e-44 | 202 | 296 | 170 | 263 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002520569.1 | 1.4013e-45 | 108 | 293 | 67 | 246 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-19 | 204 | 293 | 7 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |