y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si036391m |
Family | CBM43 |
Protein Properties | Length: 352 Molecular Weight: 37043.6 Isoelectric Point: 7.5426 |
Chromosome | Chromosome/Scaffold: 9 Start: 24215714 End: 24219246 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 264 | 346 | 5.5e-33 |
WCVAKPTVPEDKLQEAMDYACSQDGVDCQEIAAGGSCFYPDNIASHASYAFNSYWQKMKQIGGSCNFGGTALLINSDPSYLQC |
Full Sequence |
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Protein Sequence Length: 352 Download |
MEFLLLFLVS GSLLLPSLGL AVSGQEARQL VHLNGPSQTG VHVSVARKDL PMVASSVLGA 60 ESWLRTHVLA QYPSEHITAI VVGRGVTCNH GQELLRLRLL HAVKNLHHSL VRWGLVDDIK 120 VTSASPVCAR DRAVLQRRLY GRHHLPATFR PPQPPVASTY MPPPPGVALS FAPNYPPEVV 180 PSVPPTAAVP PHSPAVPASP PSMVSASPPL TMPSTPPTSI PASPPEVTGG MAPSATPPPC 240 LAPPTAAMSP PPWSGEGGNS GGLWCVAKPT VPEDKLQEAM DYACSQDGVD CQEIAAGGSC 300 FYPDNIASHA SYAFNSYWQK MKQIGGSCNF GGTALLINSD PSYLQCRFML S* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 0.0002 | 37 | 124 | 88 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 4.0e-26 | 263 | 334 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-43 | 263 | 348 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK92657.1 | 0 | 16 | 342 | 22 | 335 | AC079634_18 Putative protein with similarity to glucan endo-1,3-beta-glucosidase [Oryza sativa Japonica Group] |
GenBank | ABG66028.1 | 0 | 16 | 351 | 22 | 342 | expressed protein [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI33700.1 | 0 | 3 | 351 | 13 | 357 | unnamed protein product [Vitis vinifera] |
GenBank | EAY78123.1 | 0 | 16 | 342 | 22 | 335 | hypothetical protein OsI_33170 [Oryza sativa Indica Group] |
RefSeq | NP_001064401.1 | 0 | 16 | 351 | 22 | 344 | Os10g0347000 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-20 | 262 | 348 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.0006 | 37 | 124 | 46 | 130 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |