y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr8g085400.1 |
Family | CBM43 |
Protein Properties | Length: 117 Molecular Weight: 12460.3 Isoelectric Point: 7.8605 |
Chromosome | Chromosome/Scaffold: 8 Start: 23346222 End: 23346572 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 33 | 108 | 6e-31 |
WCVSRSEAGTQQLLDALNYACGAGADCGPIQPGGSCYYPNTLQNHASYAFNSYYQKARGSCDFVGSAHIVFNDPSM |
Full Sequence |
---|
Protein Sequence Length: 117 Download |
MATSKLISVM LMLTFATTII LINVVIVGGK KTWCVSRSEA GTQQLLDALN YACGAGADCG 60 PIQPGGSCYY PNTLQNHASY AFNSYYQKAR GSCDFVGSAH IVFNDPSMNI IHSPFN* 120 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-20 | 32 | 100 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-34 | 32 | 108 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 1e-30 | 1 | 107 | 1 | 107 | unknown [Glycine max] |
EMBL | CAB41118.1 | 2e-25 | 33 | 116 | 61 | 147 | putative protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 2e-27 | 29 | 107 | 46 | 127 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300169.1 | 9e-27 | 32 | 107 | 1 | 79 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518089.1 | 9e-28 | 7 | 107 | 1 | 104 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-19 | 32 | 114 | 12 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |