y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G198500.2 |
Family | CBM43 |
Protein Properties | Length: 210 Molecular Weight: 20987.2 Isoelectric Point: 7.6789 |
Chromosome | Chromosome/Scaffold: 08 Start: 48328930 End: 48333310 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 26 | 108 | 2.3e-33 |
WCVCKDGVGDGNLQKTLDYACGNGADCNAIRSNGPCYNPNTVKAHCNYAVNSYFQKKGQGQGSCEFAGTAAITTTDPSSAGCS |
Full Sequence |
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Protein Sequence Length: 210 Download |
MAATLLFALL ILAITAGHSS GATGKWCVCK DGVGDGNLQK TLDYACGNGA DCNAIRSNGP 60 CYNPNTVKAH CNYAVNSYFQ KKGQGQGSCE FAGTAAITTT DPSSAGCSYP SSASGGGTTL 120 TPTTPGTTTT PSSSTTTTPS IMTPGTNTPT STTPYSSTTP TGVLGGVGTG LGPSGTTSTN 180 TDYSHGGFRL QPISSFTTLL FSGFMLIWG* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-21 | 25 | 95 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-33 | 25 | 101 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92735.1 | 0 | 3 | 206 | 2 | 207 | unknown [Populus trichocarpa] |
GenBank | ABK93473.1 | 2.8026e-45 | 22 | 206 | 17 | 211 | unknown [Populus trichocarpa] |
GenBank | ACU14839.1 | 1.4013e-45 | 26 | 209 | 21 | 205 | unknown [Glycine max] |
RefSeq | XP_002284112.1 | 0 | 3 | 209 | 2 | 207 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514663.1 | 0 | 3 | 209 | 2 | 215 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-23 | 22 | 111 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |