y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.166770.1 |
Family | CBM43 |
Protein Properties | Length: 173 Molecular Weight: 18365 Isoelectric Point: 7.678 |
Chromosome | Chromosome/Scaffold: 01154 Start: 128699 End: 130384 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 49 | 131 | 3.3e-35 |
WCVAKAGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASFAFNSYYQQNGNSDIACNFGGCATLTKKDPSYGKC |
Full Sequence |
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Protein Sequence Length: 173 Download |
MKTKIWVLEI LLLFLHYFFL GGAMAAEAGM PVMAAPAEGN TTFIDGTTWC VAKAGVSQID 60 LQNALDWACG MGKADCRAIQ KGGRCYEPDT LLSHASFAFN SYYQQNGNSD IACNFGGCAT 120 LTKKDPSYGK CDYSASSSTN SAPSKSKNSP THICLKLVSV VSVVLNLYFG SS* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-20 | 48 | 120 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 48 | 133 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 1 | 161 | 1 | 171 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 11 | 147 | 5 | 153 | unknown [Glycine max] |
EMBL | CBI30973.1 | 0 | 1 | 151 | 549 | 705 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ02781.1 | 0 | 1 | 139 | 1 | 146 | hypothetical protein OsI_24906 [Oryza sativa Indica Group] |
RefSeq | XP_002274294.1 | 0 | 26 | 127 | 9 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-21 | 48 | 138 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |