y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011702m |
Family | GT47 |
Protein Properties | Length: 480 Molecular Weight: 55110.6 Isoelectric Point: 9.6646 |
Chromosome | Chromosome/Scaffold: 00051 Start: 609693 End: 612773 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 147 | 431 | 0 |
EKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTC GADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKD LIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV |
Full Sequence |
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Protein Sequence Length: 480 Download |
MENFRGYLLP AVSLLFATSV LFILILSSSD YFSSFSMISF NSTASNFEFK SSVPTADLLR 60 TVSVSDHEIQ AVRFTGSNNV LKRESSARVL SKYEQLKQGL ARARASIRKA ASTRNVTSII 120 KNGVDFVPSA AIYRNPGAFY QSYVEMEKRF KVYVYREGEL PITHYGPCKD IYTIEGRFMS 180 EIEHGAKRFR TSDPHRAHVY YLPFSVAWMV KYLYKPLTYD LTPLKQFVAD YVKVVSSKYP 240 FWNRTCGADH FMLACHDWGP HVSKGNSHLY NNSIRVLCNA NTSEGFNPQK DVTLPEIHLY 300 GGYVSPKLLS PPPFNAPRPY LAFFAGGLHG TIRSILLQHW KGHDKDLIVF EYLPKDQDYY 360 SFMLKSKFCL CPSGYEVASP RIVESIYAQC VPVILSQNYV LPFSDVLRWE AFSIQVDVSE 420 IPRLKEVLMA VPEEKYKRLK ENLKAVRRHF ELNHPAKRFD VFHMILHSIW LRRLNMRLG* 480 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-62 | 146 | 431 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21064.1 | 0 | 45 | 479 | 37 | 478 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197913.4 | 0 | 12 | 478 | 14 | 479 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002285237.1 | 0 | 146 | 479 | 1 | 334 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324871.1 | 0 | 146 | 478 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515489.1 | 0 | 20 | 479 | 20 | 481 | catalytic, putative [Ricinus communis] |