y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000190524 |
Family | GT47 |
Protein Properties | Length: 482 Molecular Weight: 55975.1 Isoelectric Point: 9.2141 |
Chromosome | Chromosome/Scaffold: 011178384 Start: 3448 End: 6486 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 149 | 433 | 0 |
KRFKIWAYKEGEIPMFHNGPMSYIYSIEGHFIDELDSSGKSPFLARHHDEAHSFFVPVSVKRIADFLYDRPNPYTFHGRLVRIVTDYINVVAQKYPYWNR SXGADHFMLSCHDWAPEIIDDDRDFYKNFIRVLCNSNTSEGFQPKRDVSLPEYNIPEHTLGPSLLDKHPDKRPILAFFAGGAHGDIRKFLFEHWRDKDDE IQVHEYLPKGQNYHEIMGRTKFCLCPSGSEVASPRVVKAMYAGCVPVLISDYYSLPFANVLDWSKFTVXIPPKRIPEXKTILKAV |
Full Sequence |
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Protein Sequence Length: 482 Download |
MAAFEFRSPY FFSLTFLLLL LLLLLSFSPF NQFHFTPLNP HSSPSAPLQI RNHTASYQYA 60 TLNPAPSPSP SXSTVADNLQ EKSSTQAARL KRSWREPEPP SAKPFVPKTT HLTDKKFTSP 120 EEVSTEIPML FTSKRNLINF YMSHIEMVKR FKIWAYKEGE IPMFHNGPMS YIYSIEGHFI 180 DELDSSGKSP FLARHHDEAH SFFVPVSVKR IADFLYDRPN PYTFHGRLVR IVTDYINVVA 240 QKYPYWNRSX GADHFMLSCH DWAPEIIDDD RDFYKNFIRV LCNSNTSEGF QPKRDVSLPE 300 YNIPEHTLGP SLLDKHPDKR PILAFFAGGA HGDIRKFLFE HWRDKDDEIQ VHEYLPKGQN 360 YHEIMGRTKF CLCPSGSEVA SPRVVKAMYA GCVPVLISDY YSLPFANVLD WSKFTVXIPP 420 KRIPEXKTIL KAVPHSEFLK LQKRVMQVRX HFMLNRPAKP YDVFHMVLHS IWLRRLDIRL 480 PN 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-57 | 147 | 433 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21065.1 | 0 | 135 | 481 | 54 | 401 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 135 | 481 | 127 | 476 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 135 | 482 | 46 | 396 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266490.1 | 0 | 135 | 482 | 43 | 387 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331028.1 | 0 | 147 | 482 | 1 | 334 | predicted protein [Populus trichocarpa] |