y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000631221 |
Family | GT47 |
Protein Properties | Length: 389 Molecular Weight: 43076.2 Isoelectric Point: 7.7982 |
Chromosome | Chromosome/Scaffold: 003941178 Start: 241 End: 3082 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 202 | 317 | 2.2e-30 |
EKVFKIYVYEEGEVPIFHEGPCRGIYSSEGRFIHEMEKGKFYRTKDPHKALVYFLPFSVVTMVEYIYMPETFDRSGMKLAVVDYINLISHKHPFWNRSHG ADHFMLSCHDWDHCNS |
Full Sequence |
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Protein Sequence Length: 389 Download |
MRPSRNKPVS SLSSILVGLI LVLTLAVSLL VISRASSSSS SSSSSSETTW KVAAASAGGS 60 SDINTTTTTY SHAALTSTQP PPQPLLFSFS SLNNLNTANS SPAPAPAPQI SAADVLQETI 120 IQKVEGDVIN TVDNDVVANR TVFISGSQLD KVEASLGRAX SAIREAAKVR NKTSTHQDPD 180 YVPRGPIYHN PNAFHRSYLE MEKVFKIYVY EEGEVPIFHE GPCRGIYSSE GRFIHEMEKG 240 KFYRTKDPHK ALVYFLPFSV VTMVEYIYMP ETFDRSGMKL AVVDYINLIS HKHPFWNRSH 300 GADHFMLSCH DWDHCNSWFR DIYEARYVIS LPEENMIGKT FVSNTSKFVN GSPTSRNPSN 360 GLYDWHVGTL SWSVRHAPTS MQGERAVR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-13 | 201 | 319 | 126 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83915.1 | 0 | 148 | 312 | 215 | 379 | limonene cyclase like protein [Oryza sativa Japonica Group] |
EMBL | CBI28483.1 | 0 | 174 | 312 | 58 | 196 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001059081.1 | 0 | 148 | 336 | 215 | 420 | Os07g0188700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459470.1 | 0 | 148 | 358 | 181 | 404 | hypothetical protein SORBIDRAFT_02g005180 [Sorghum bicolor] |
RefSeq | XP_002524591.1 | 0 | 134 | 312 | 104 | 284 | catalytic, putative [Ricinus communis] |