y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_007_00529.2 |
Family | GT47 |
Protein Properties | Length: 327 Molecular Weight: 38222.1 Isoelectric Point: 9.1022 |
Chromosome | Chromosome/Scaffold: 7 Start: 4237117 End: 4242072 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 279 | 0 |
EKNFKVFMYPDGDPNTFYQTPRKITGKYASEGYFFKNIRESHFLTDDPDQAHLFFIPISCHKMRGKGTSYDNMTIIVDEYVQLLMMKYPYWNRTLGADHF FVACQDVGVRATERVPYLVKNSIRVVCSPSYNVGFIPHKDVALPQILQPFPLPEGGNDLENRTILGYWAGSRNSKIRVILAKVWENDTELVVKSSRINRA TGHLLYQRNYYKTKFCICPGGSQVNSARIGDSIHYGCVPVILSDYYDLPFNDILNWRKFSVILKESDVYRLKYILKEI |
Full Sequence |
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Protein Sequence Length: 327 Download |
MEKNFKVFMY PDGDPNTFYQ TPRKITGKYA SEGYFFKNIR ESHFLTDDPD QAHLFFIPIS 60 CHKMRGKGTS YDNMTIIVDE YVQLLMMKYP YWNRTLGADH FFVACQDVGV RATERVPYLV 120 KNSIRVVCSP SYNVGFIPHK DVALPQILQP FPLPEGGNDL ENRTILGYWA GSRNSKIRVI 180 LAKVWENDTE LVVKSSRINR ATGHLLYQRN YYKTKFCICP GGSQVNSARI GDSIHYGCVP 240 VILSDYYDLP FNDILNWRKF SVILKESDVY RLKYILKEIP DEEFVALHTN LVKVQKHFHW 300 NTPPIKYDAF HMVMYELWLR RHVIKY* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-58 | 1 | 279 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38234.1 | 0 | 1 | 326 | 1 | 326 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266299.1 | 0 | 1 | 326 | 91 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268836.1 | 0 | 1 | 326 | 92 | 417 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303415.1 | 0 | 1 | 326 | 1 | 326 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522880.1 | 0 | 1 | 326 | 81 | 406 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH770778 | 275 | 17 | 291 | 0 |
EX317869 | 278 | 26 | 303 | 0 |
GO268625 | 269 | 1 | 269 | 0 |
DV693456 | 261 | 1 | 261 | 0 |
EG459159 | 264 | 64 | 327 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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