y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_55.7 |
Family | GT47 |
Protein Properties | Length: 422 Molecular Weight: 47819.8 Isoelectric Point: 9.1101 |
Chromosome | Chromosome/Scaffold: 55 Start: 32186 End: 37688 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 97 | 374 | 0 |
ERSFKVYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFRTMDPDQADLFFIPISCHKMRGKGTSYENMTIIVQNYVDSLVVKYPYWNRTLGADHF FVTCHDVGVRATEGVPFLVKNAIRAVCSPSYDVGFIPHKDIALPQVLQPFALPAGGNDIESRTTLGFWAGHRNSKIRVILARVWENDTELDISNNRINRA TGHLVYQKRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWKKFAVVLKESDVYQLKKILKDI |
Full Sequence |
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Protein Sequence Length: 422 Download |
MSAGKQPQQL LSSFSSASAA TSPLCSLKAS LLSLAVLTLL SFTYLSLNSL NSSAPQVTTV 60 TAITVDRRKG ESDGGGGDLS DVYHLPEVFR LNYAEMERSF KVYIYPDGDP NTFYQTPRKL 120 TGKYASEGYF FQNIRESRFR TMDPDQADLF FIPISCHKMR GKGTSYENMT IIVQNYVDSL 180 VVKYPYWNRT LGADHFFVTC HDVGVRATEG VPFLVKNAIR AVCSPSYDVG FIPHKDIALP 240 QVLQPFALPA GGNDIESRTT LGFWAGHRNS KIRVILARVW ENDTELDISN NRINRATGHL 300 VYQKRFYRTK FCICPGGSQV NSARIADSIH YGCVPVILSN YYDLPFNDIL DWKKFAVVLK 360 ESDVYQLKKI LKDIPDSKFA SLHMNLVKVQ KHFQWNSPPI KYDAFHMVMY DLWLRHYVIK 420 Y* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-57 | 96 | 374 | 298 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18220.1 | 0 | 26 | 421 | 10 | 409 | unknown [Glycine max] |
RefSeq | NP_195517.1 | 0 | 12 | 421 | 7 | 425 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002266299.1 | 0 | 1 | 421 | 1 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307304.1 | 0 | 24 | 421 | 1 | 406 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522880.1 | 0 | 1 | 421 | 1 | 406 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH770778 | 275 | 112 | 386 | 0 |
GO268625 | 269 | 96 | 364 | 0 |
JG847451 | 264 | 82 | 345 | 0 |
EX317869 | 278 | 121 | 398 | 0 |
EG459159 | 264 | 159 | 422 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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