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Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000183678 |
Family | GT47 |
Protein Properties | Length: 558 Molecular Weight: 62970.5 Isoelectric Point: 7.2162 |
Chromosome | Chromosome/Scaffold: 007745333 Start: 8884 End: 14074 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 196 | 477 | 0 |
EKHFKIFVYGEGEPPIFHNGPCKSIYSTEGRSIHEMEMENVYRTRDPDEALVYFLPFSVVMLVQYLYVADSHDTXPIGRAVIDYVNVISDKHPFWNRSLG ADHFMXSCHHWGPSTSAYVPNLYHNSIRVLCNANTSEGFNPSKDVSFPEIHLRTGETEGLLGGLSPSXRSILAFFAGRLSGHIRYLLLNEWKEKDQDVQV YDQFPNGVSYESMLKKNRFCLCPSGYEVASPRVVEAIYAECVPVLISDSYVPPFSDVLEWKSFSVQVKVKDIPNIKRILKGI |
Full Sequence |
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Protein Sequence Length: 558 Download |
MKPPLNNMKP NYLLWSSSYS VLILAFVVPF FVISVLVSSL GFTSLLSWSW RFGNVLETED 60 XASSSSLAFS ATATPPRXPP QVLEAAAQAH NITSSSKPNE EVVPHQNIGE KQGMVWINGT 120 EFDETNGTSA IITSTPIKRY SRLEKLEANL AGVRXSIREA ARVRNLTSTH EDPDYVPHGP 180 IYRNANAFHR SYLEMEKHFK IFVYGEGEPP IFHNGPCKSI YSTEGRSIHE MEMENVYRTR 240 DPDEALVYFL PFSVVMLVQY LYVADSHDTX PIGRAVIDYV NVISDKHPFW NRSLGADHFM 300 XSCHHWGPST SAYVPNLYHN SIRVLCNANT SEGFNPSKDV SFPEIHLRTG ETEGLLGGLS 360 PSXRSILAFF AGRLSGHIRY LLLNEWKEKD QDVQVYDQFP NGVSYESMLK KNRFCLCPSG 420 YEVASPRVVE AIYAECVPVL ISDSYVPPFS DVLEWKSFSV QVKVKDIPNI KRILKGISQS 480 QYLRMQRXVK QGTHSYQDLS LFISRVLSHL REKRRFTGKL GAMASSFGTG AANMDLPRXS 540 MFSIDCSFHL AQEVEHPH 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-58 | 195 | 477 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU04753.1 | 0 | 190 | 491 | 7 | 308 | EXO [Cucumis melo] |
EMBL | CBI28483.1 | 0 | 138 | 491 | 28 | 381 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264076.1 | 0 | 195 | 491 | 1 | 297 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320538.1 | 0 | 195 | 491 | 1 | 297 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524591.1 | 0 | 137 | 491 | 115 | 469 | catalytic, putative [Ricinus communis] |