y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C01012.2 |
Family | GT47 |
Protein Properties | Length: 697 Molecular Weight: 79812.8 Isoelectric Point: 9.8552 |
Chromosome | Chromosome/Scaffold: 3 Start: 16065056 End: 16069920 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 366 | 647 | 0 |
ILKVYIYKEGERPVFHQPILKGLYASEGWFMKLMKGNKQFLVKDPRKGHLFYMPFSSRMLEYAVYVRNSHNRTNLRQYLKQYTDKISARYPFFNRTGGAD HFLVACHDWAPYETRHHMERCIKALCNADVTAGFKIGRDVSLPETYVRSARNPLRDLGGKPPSQRRILAFYAGNNHGYLRTILLKHWKDKDPDMKIFGPM PPGVASKMSYIRYMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLDWGAFSIILAEKDIPNLKNTLLSI |
Full Sequence |
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Protein Sequence Length: 697 Download |
MCWCGSPLPA MRLCVEFQRL FLSKNRRWLF LVALVATTHL MFQSLLLPYG TALQSLLPDR 60 KILTADNATF SNTHSSAKSV MVRNPLTVNV SESAEALVFL GAIKSNKNFN GGEDIGHYDG 120 QNRVDRQEQK SNAPEGSIDH VIEMGAANRK EGGLSSDKIM HTSKSLVMQG REFENHTFVP 180 VMASDTHSVS LELTVELDNR TLSGDSQSET LSLPQETLKD LETEFHSTTL TPPATPARAL 240 PSDTNNVKDL MWNASNSFHS AGAQNISTSS QDQSSATINP GKKKMRCNMP PKSVTTIEEM 300 NHIYVRHRVS SRSMRPRWSS KRDQEILAAK LQIENASVAI NNQELYSPLF RNVSMFIRSY 360 QLMEQILKVY IYKEGERPVF HQPILKGLYA SEGWFMKLMK GNKQFLVKDP RKGHLFYMPF 420 SSRMLEYAVY VRNSHNRTNL RQYLKQYTDK ISARYPFFNR TGGADHFLVA CHDWAPYETR 480 HHMERCIKAL CNADVTAGFK IGRDVSLPET YVRSARNPLR DLGGKPPSQR RILAFYAGNN 540 HGYLRTILLK HWKDKDPDMK IFGPMPPGVA SKMSYIRYMK SSKYCICPKG YEVNSPRVVE 600 AIFYECVPVI ISDNFVPPFF EVLDWGAFSI ILAEKDIPNL KNTLLSIPEE KYREMQLRVR 660 KVQRHFLWHA KPVKYDLFYM TLHSIWYNRV FQIKLR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-63 | 367 | 647 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 11 | 692 | 710 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 11 | 694 | 1 | 711 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_197468.1 | 0 | 285 | 696 | 199 | 600 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002283936.1 | 0 | 289 | 696 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514248.1 | 0 | 11 | 696 | 1 | 676 | catalytic, putative [Ricinus communis] |