y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.125030.1 |
Family | GT47 |
Protein Properties | Length: 517 Molecular Weight: 59012.5 Isoelectric Point: 9.2602 |
Chromosome | Chromosome/Scaffold: 01001 Start: 833032 End: 835936 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 187 | 468 | 0 |
EKEMKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDSQFRTKDPNKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVVDYINVIGTKYPFWNRSLG ADHFMLSCHDWGPEASKSVPNLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGHLTGFLGGPSPSHRPIMAFFAGGLHGPIRPILIQRWENQDQDIQV HQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVINWKSFSVEVSVDDIPNLKTILTGI |
Full Sequence |
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Protein Sequence Length: 517 Download |
MKFPVFVIPL IAVSCFLAVL GPRFNTDWTI FFDKYASTQP SLSSSFKREG FHSNTSVPVA 60 TEEAAAANVS VLSFSSPPPP VDDGKQSLQL HPNRTRVNED LGETATTINE VIRKVSNESS 120 YESAVKVRAR RQREYTKLER IEAGLRRARA AIREAKFLNQ TQDPDFVPSG PMYWNSKAFH 180 RSYLEMEKEM KIFVYEEGEP PLFHNGPCKS IYSTEGNFIH AIEMDSQFRT KDPNKAHVFF 240 LPLSVAMLVR FVYVHDSHDF TPIRHTVVDY INVIGTKYPF WNRSLGADHF MLSCHDWGPE 300 ASKSVPNLYK NSIRVLCNAN TSEGFNPSKD VSFPEINLQT GHLTGFLGGP SPSHRPIMAF 360 FAGGLHGPIR PILIQRWENQ DQDIQVHQYL PKGVSYIDMM RKSKFCLCPS GYEVASPRIV 420 EAIYTGCVPV LISDHYVPPF SDVINWKSFS VEVSVDDIPN LKTILTGIST RQYLRMYRRV 480 VKVRRHFEVN SPPKRYDVYH MILHSVWLRR LNLRLR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-67 | 186 | 468 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 111 | 516 | 1 | 406 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 95 | 516 | 94 | 516 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 186 | 515 | 1 | 330 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002524591.1 | 0 | 101 | 516 | 91 | 503 | catalytic, putative [Ricinus communis] |
RefSeq | XP_002528630.1 | 0 | 59 | 515 | 98 | 565 | catalytic, putative [Ricinus communis] |