y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.003G222300.1 |
Family | GT47 |
Protein Properties | Length: 549 Molecular Weight: 63263.6 Isoelectric Point: 10.1098 |
Chromosome | Chromosome/Scaffold: 03 Start: 43980675 End: 43985320 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 211 | 497 | 0 |
TLKVYIYRDGSRPIFHKPPLKGIYASEGWFMKLMEENKQFVTRNPEKAHLFYLPYSARQMGLALYVPGSHNLKPLSNFLRDYVNKIAAKYPFWNRTHGSD HFLVACHDWGPYTVTGHEELAKNTIKALCNADLSERIFIAGRDVSLPETTIRVPRKPLRYLGGNRASLRPILAFFAGSMHGRVRPTLLKYWGGGKDEDMK IYKRLPLRVSQRMTYIQHMKSSKYCVCPMGFEVNSPRIVEAIYYECVPVIIADNFVLPFNEVLDWSAFSVVVAEKDIPRLKEILLSI |
Full Sequence |
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Protein Sequence Length: 549 Download |
MKKIFQQSAF ILIRELLWRC FGNKVIWRRF FVLVAVLTVS AFAFQTLVHT CLVLPDRPFG 60 SHHRTDYSLL QSSSSSLQSE ESLKEGTLQK VHLTLTNSVI SPDASNKLLQ SFSVEQENAE 120 LESRVQRKSS GTASKKDTNI ADTTKGVVSL SPQRHVPKQK HIWLLPPNEA LVLAKREIDH 180 APAVNEDPDL YAPIFRNISV FKRSYELMEM TLKVYIYRDG SRPIFHKPPL KGIYASEGWF 240 MKLMEENKQF VTRNPEKAHL FYLPYSARQM GLALYVPGSH NLKPLSNFLR DYVNKIAAKY 300 PFWNRTHGSD HFLVACHDWG PYTVTGHEEL AKNTIKALCN ADLSERIFIA GRDVSLPETT 360 IRVPRKPLRY LGGNRASLRP ILAFFAGSMH GRVRPTLLKY WGGGKDEDMK IYKRLPLRVS 420 QRMTYIQHMK SSKYCVCPMG FEVNSPRIVE AIYYECVPVI IADNFVLPFN EVLDWSAFSV 480 VVAEKDIPRL KEILLSIPVR KYLTMQNNVK MLQKHFLWNP RPIRYDLFHM ILHSIWLNKL 540 NQIQTLQI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-68 | 212 | 497 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23466.1 | 0 | 1 | 544 | 1 | 534 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_567512.2 | 0 | 165 | 545 | 153 | 533 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002269459.1 | 0 | 1 | 544 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303362.1 | 0 | 163 | 547 | 1 | 385 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530666.1 | 0 | 12 | 544 | 1 | 524 | catalytic, putative [Ricinus communis] |