y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01003953001 |
Family | GT47 |
Protein Properties | Length: 417 Molecular Weight: 47979.8 Isoelectric Point: 8.2657 |
Chromosome | Chromosome/Scaffold: Start: 14012896 End: 14017852 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 92 | 369 | 0 |
EKNFKVYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRDSRFRTNDPDQAHLFFIPISCHKMRGKGTSYENMTVIVQNYVGSLISKYPYWNRTLGADHF FVTCHDVGVRATEGVPFLVKNSIRVVCSPSYDVGFIPHKDVALPQVLQPFALPAGGNDIENRTTLGFWAGHRNSKIRVILARVWENDTELDIMNNRINRA AGELLYQKRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFSVVLKELDVYQLKQILKDI |
Full Sequence |
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Protein Sequence Length: 417 Download |
MTAVKSPQQA VASSTLCSIH GSLLTLATLT LISFTYISLK SLHSPFHDPS FNSSPPPQVI 60 SRVEHLVEEE DSPFSDIYHS PEIFRLNYRE MEKNFKVYIY PDGDPNTFYQ TPRKLTGKYA 120 SEGYFFQNIR DSRFRTNDPD QAHLFFIPIS CHKMRGKGTS YENMTVIVQN YVGSLISKYP 180 YWNRTLGADH FFVTCHDVGV RATEGVPFLV KNSIRVVCSP SYDVGFIPHK DVALPQVLQP 240 FALPAGGNDI ENRTTLGFWA GHRNSKIRVI LARVWENDTE LDIMNNRINR AAGELLYQKR 300 FYRTKFCICP GGSQVNSARI ADSIHYGCVP VILSNYYDLP FNDILDWRKF SVVLKELDVY 360 QLKQILKDIP DAEFVALHNN LVQVQKHFQW NSPPIRYDAF HMIMYELWLR HQVIKY* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-58 | 91 | 369 | 298 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18220.1 | 0 | 18 | 416 | 10 | 409 | unknown [Glycine max] |
RefSeq | NP_195517.1 | 0 | 1 | 416 | 1 | 425 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002266299.1 | 0 | 1 | 416 | 1 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307304.1 | 0 | 16 | 416 | 1 | 406 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522880.1 | 0 | 1 | 416 | 1 | 406 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |