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Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01015329001 |
Family | GT47 |
Protein Properties | Length: 666 Molecular Weight: 76404.2 Isoelectric Point: 8.6887 |
Chromosome | Chromosome/Scaffold: 11 Start: 2744484 End: 2751691 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 392 | 593 | 0 |
RILKVYVYKDGEKPIFHQPILKGLYASEGWFMKLMERNKHFVVKDPRQAQLFYMPFSSRMLEYKLYVRNSHNRTNLRQYLKQYSEKIAAKYRFWNRTGGA DHFLVACHDWAPYETRHHMEQCIKALCNADVTAGFKIGRDVSLPETYVRSARNPLRDLGGKPPSERHILAFYAGNMHGYLRPILLKYWKDKDPDMKIYGP MP |
Full Sequence |
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Protein Sequence Length: 666 Download |
MVRKMVFLLF RSLSIPVTDA PWSQFGCLES GGRRKEGHIF CCFDVYQTDR TRTAEKLAIT 60 YLLCQSLLLP YGNALLSLLP DRDVPIYDNF SSPTRQSSVR SFMVNKSLLS NASDLTDTSL 120 FVEVVEDVEK SNVTVEFGDD NGTEGTDEDI EDGLALERED LENIVEFNED DNGPKEKGGD 180 TENFASESKG MDHVVEFTKD NNISKGLPFK KVVDMDGISA LEYVNNQENS SDLKKDSEMR 240 HIGSAVHIVK PPNEGISTDN IVKADASLTP STPGSLEKEI LSKDENLLVL QSDLADLNNN 300 SAMTSNPGRK KMQSEMPPKS VTSIYDMNRR LVRHRASSRA MRPRWASPRD QEMLAAKLQI 360 QNAPRVKNDP ELHAPLFRNV SMFKRSYELM ERILKVYVYK DGEKPIFHQP ILKGLYASEG 420 WFMKLMERNK HFVVKDPRQA QLFYMPFSSR MLEYKLYVRN SHNRTNLRQY LKQYSEKIAA 480 KYRFWNRTGG ADHFLVACHD WAPYETRHHM EQCIKALCNA DVTAGFKIGR DVSLPETYVR 540 SARNPLRDLG GKPPSERHIL AFYAGNMHGY LRPILLKYWK DKDPDMKIYG PMPPGLRGQQ 600 PTEKDIPNLK DVLLSIPNDK YLQMQLGVRK VQKHFLWHAK PLKYDLFHMT LHSIWYNRVF 660 QVKPR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-27 | 394 | 591 | 220 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 57 | 661 | 734 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 92 | 592 | 46 | 582 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 1e-21 | 603 | 663 | 651 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28020.1 | 0 | 1 | 665 | 1 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283936.1 | 0 | 316 | 665 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |