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Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000293604 |
Family | GT47 |
Protein Properties | Length: 578 Molecular Weight: 65285.9 Isoelectric Point: 7.2316 |
Chromosome | Chromosome/Scaffold: 013978597 Start: 39956 End: 42959 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 215 | 495 | 0 |
EXFKVFVYGEGEPPLFHNGPCKSIYSMEGNFIHEIEVNKQFRTRDPEKAHVYFLPFSVTMLVRFVYVRDSHDFGPIRRTVRDYVNIVSEKYPYWNRSLGA DHFMLACHDWGPETSNSNPHLRKNSIRALCNANTSEGFNPSKDVSFPEINLQTGDTHGFIGGPSPRLRSILGFFAGGVHGPIRPILLEHWENKDPDLRVH QYLPKGVSYYDMMRQSRFCLCPSGYEVASPRVVEAIYTGCIPVLISDHYVPPFSDVLNWRSFSIEVSASDIPNLKKILTSI |
Full Sequence |
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Protein Sequence Length: 578 Download |
MAASSKKVGA TSSSGSTHQH AWWSSSSSIA ALLFVVPLVV VFGLISLLGP DTANWVFTSP 60 SASLPLNLTA TSTSSGYSNS NDDVLGLQST VVVVDMHGIE EAHSDDSVQN RSSSPPLAIE 120 EEEEAALPTL QQPVCPSSLS CMGDDFTNET HASIMERRQR KKTNLGWLEA RLRRARAAIR 180 EAKFGNQTRD VDYIPNGPMY WNANAFHRSY LEMEEXFKVF VYGEGEPPLF HNGPCKSIYS 240 MEGNFIHEIE VNKQFRTRDP EKAHVYFLPF SVTMLVRFVY VRDSHDFGPI RRTVRDYVNI 300 VSEKYPYWNR SLGADHFMLA CHDWGPETSN SNPHLRKNSI RALCNANTSE GFNPSKDVSF 360 PEINLQTGDT HGFIGGPSPR LRSILGFFAG GVHGPIRPIL LEHWENKDPD LRVHQYLPKG 420 VSYYDMMRQS RFCLCPSGYE VASPRVVEAI YTGCIPVLIS DHYVPPFSDV LNWRSFSIEV 480 SASDIPNLKK ILTSISSRQY LRMQRRVLQV RRHFEVNSPP KRFDVFHMIL HSIWLRRLNL 540 DAYEYHDSPT VGLNPPFIAL ICLCICDAHL DGLLLRRL 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-64 | 213 | 495 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 152 | 544 | 15 | 407 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 152 | 544 | 125 | 517 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 213 | 545 | 1 | 333 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 213 | 540 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 186 | 544 | 209 | 567 | catalytic, putative [Ricinus communis] |