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Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10024835m |
Family | GT47 |
Protein Properties | Length: 552 Molecular Weight: 63355.4 Isoelectric Point: 9.9957 |
Chromosome | Chromosome/Scaffold: 1 Start: 10424431 End: 10426907 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 206 | 491 | 0 |
LKVYIYPDGEKPIFHQPHLNGIYASEGWFMKLMESNTQFVTKNPEKAHLFYMPYSVKQLQHAIFVPGSHNIKPLSIFLRDYVNMLSIKYPFWNRTHGSDH FLVACHDWGPYTVNEHPELSRNAIKALCNADLSDGIFVPGKDVSLPETSIRNAGRPLRYIGNGNRVSQRPILAFFAGNLHGRVRPQLLKHWRNKDEDMRI YGPLPHNVARKMTYVQHMKSSKYCLCPMGYEVNSPRIVEAIYYECVPVVIADNFVLPFSDLLDWSAFSVVVPEKEIPRLKEILLEI |
Full Sequence |
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Protein Sequence Length: 552 Download |
MVKMKSPLRV FIEVSMKELI KGFRRQMIKW RNAFLLGSIM TTIVVLLHTP TFPIFSDDEE 60 TESSSSSSSS PIYLNGSLHL NIQIVSSESK VESFPALTAT PTKELNSSSG GKPVDESVLS 120 RKRRKRKKRK KTKDELILPD PPPAPKHVLS SSERHALSLP PKEALAYAKL EIQRAPQVVN 180 DTDLFAPVFR NLSVFKRSYE LMELILKVYI YPDGEKPIFH QPHLNGIYAS EGWFMKLMES 240 NTQFVTKNPE KAHLFYMPYS VKQLQHAIFV PGSHNIKPLS IFLRDYVNML SIKYPFWNRT 300 HGSDHFLVAC HDWGPYTVNE HPELSRNAIK ALCNADLSDG IFVPGKDVSL PETSIRNAGR 360 PLRYIGNGNR VSQRPILAFF AGNLHGRVRP QLLKHWRNKD EDMRIYGPLP HNVARKMTYV 420 QHMKSSKYCL CPMGYEVNSP RIVEAIYYEC VPVVIADNFV LPFSDLLDWS AFSVVVPEKE 480 IPRLKEILLE IPMRRYLKMQ SSVKMVQRHF LWSPKPRRYD VFHMILHSIW FNLINQNQTS 540 SSSSSHHDPD S* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-68 | 206 | 491 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10449.1 | 0 | 24 | 551 | 512 | 1024 | limonene cyclase like protein [Arabidopsis thaliana] |
EMBL | CBI23466.1 | 0 | 28 | 545 | 16 | 541 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_567512.2 | 0 | 1 | 551 | 1 | 542 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002269459.1 | 0 | 28 | 542 | 16 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002530666.1 | 0 | 70 | 542 | 54 | 528 | catalytic, putative [Ricinus communis] |