y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01015330001 |
Family | GT47 |
Protein Properties | Length: 666 Molecular Weight: 76419.9 Isoelectric Point: 9.6054 |
Chromosome | Chromosome/Scaffold: 11 Start: 2752151 End: 2755918 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 334 | 616 | 0 |
RVLKIYIYREGEKPIFHQPRLRGIYASEGWFMKLIEGNKRFVVRDPRKAHLFYVPFSSKMLRTVFYEQNSSTPRDLEKYFKNYVGLIAGKYRFWNRTGGA DHLIVACHDWAPRITRQCSWNSIRALCNSNIASGFKIGKDTTLPVTYIRKSEDPLKYLGGKPPSQRPILAFFAGSMHGYLRPILLQYWENKEQDIKIFGP MSRDDGGKSRYRDHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEILNWEAFAVFILEKDVPNLRNILLSI |
Full Sequence |
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Protein Sequence Length: 666 Download |
MDMTALFMKL CHVESRRLLF IVGLVVASVI VFQVFELPSM NTLTLSPTVK GSVSMMVGDA 60 TILKNSISAN SYVIRTVVNN SDASDLEDEA DMDYHLASDD DGDLDYSVEM HKEKNSDNEF 120 ILEKGVGLDK SMTVRNVRHT DNSPKEKAIE FRHGPLEHLK ISDNNFKIDD DRKASTSLTI 180 GEGSNRDGLV SLPLVSPGIS SKGTRNLDAD SRTSDLSTVS NVKHVMEAEK DKNTNLLQTV 240 SVPLDNNYTI ADISITRRRG MKPTTISKMN LLLLQSAVSS YSMRPRWSSP RDRELLSARS 300 EIQNAPVIRN TPGLYASVYR NVSMFKRSYE LMERVLKIYI YREGEKPIFH QPRLRGIYAS 360 EGWFMKLIEG NKRFVVRDPR KAHLFYVPFS SKMLRTVFYE QNSSTPRDLE KYFKNYVGLI 420 AGKYRFWNRT GGADHLIVAC HDWAPRITRQ CSWNSIRALC NSNIASGFKI GKDTTLPVTY 480 IRKSEDPLKY LGGKPPSQRP ILAFFAGSMH GYLRPILLQY WENKEQDIKI FGPMSRDDGG 540 KSRYRDHMKS SKYCICARGY EVHTPRVVEA IFYECVPVII SDNYVPPFFE ILNWEAFAVF 600 ILEKDVPNLR NILLSIPEEK YLQMQMRVKM VQQHFLWHKK PVKYDLFHMI LHSVWYNRVF 660 QVKPK* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-65 | 332 | 616 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 1 | 661 | 710 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 1 | 663 | 1 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 1 | 665 | 1 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 3 | 665 | 1 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281263.1 | 0 | 3 | 663 | 1 | 667 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |