y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_002819m |
Family | GT47 |
Protein Properties | Length: 694 Molecular Weight: 79181.7 Isoelectric Point: 9.3641 |
Chromosome | Chromosome/Scaffold: 09501 Start: 564496 End: 570930 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 362 | 644 | 0 |
RILKVYIYKDGKKPIFHLPILKGLYASEGWFMKLMQGSKHFIVKDPRKAHLFYMPFSSRMLEYTLYVRNSHNRTNLRQYLKEYSEKIAAKYPYWNRTGGA DHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKIGRDVSLPETYVRSARNPLRDLGGNPPSQRHILAFYAGSMHGYLRPILLKYWKDKDPSMKMFGP MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVFNWGAFSVIIAEKDIPNLKEILLSI |
Full Sequence |
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Protein Sequence Length: 694 Download |
MEFRFHKLCQ IKTRRWLLVV GAVAITHTLF QSLLLPYGNA LSSLLPNSHD LIYDKSSFPI 60 IHFSTKSLMV RNPLTVDPSS LNKSSILDGV VVKDAVSSGG SGEVTHDMGS QRNSGETEIE 120 FASEDEDLDN PIEVAVDNDG DDDDFVEEDL DNPIELVVDR NVSNFSSGNS SGNSTFESIK 180 RQESISVIEF ATEGKHDFPL LGQNGKSNLE FFTDSNPPQK ELGRIKIALL SPSVEPEVVT 240 SSTNISYSRS SGSSSVGSAI QKIGFSSKNN SARMDKPGRK KMRCEMPPKS ITLIDEMNRI 300 LVRHRRSSRS MRPRWSSHHD QEILAAKSQI ENAPVPVNDR DLYAPLFRNV SKFKRSYELM 360 ERILKVYIYK DGKKPIFHLP ILKGLYASEG WFMKLMQGSK HFIVKDPRKA HLFYMPFSSR 420 MLEYTLYVRN SHNRTNLRQY LKEYSEKIAA KYPYWNRTGG ADHFLVACHD WAPYETRHHM 480 EHCIKALCNA DVTAGFKIGR DVSLPETYVR SARNPLRDLG GNPPSQRHIL AFYAGSMHGY 540 LRPILLKYWK DKDPSMKMFG PMPPGVASKM NYIQHMKSSK YCICPKGYEV NSPRVVEAIF 600 YECVPVIISD NFVPPFFEVF NWGAFSVIIA EKDIPNLKEI LLSIPQKKYL EMQLGVKKVQ 660 RHFLWHANPV KYDLFHMTLH SIWYNRVYQI KPR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-62 | 364 | 644 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 1 | 691 | 3 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 3 | 689 | 714 | 1390 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_197468.1 | 0 | 282 | 693 | 199 | 600 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002283936.1 | 0 | 286 | 693 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514248.1 | 0 | 1 | 693 | 3 | 676 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |