y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma10g07360.1 |
Family | GT47 |
Protein Properties | Length: 524 Molecular Weight: 59971.3 Isoelectric Point: 9.2317 |
Chromosome | Chromosome/Scaffold: 10 Start: 6052965 End: 6056547 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 183 | 464 | 0 |
EKQFKVFVYEEGELPVFHDGPCSSIYSTEGSFIHAIEMNEHFRTRDPKKANVFFLPFSIAWMVRYVYIRNSYDFGPIKRTVRDYVNVIATRYPYWNRSLG ADHFMLSCHDWGPETSKSIPYLRKNSIRVLCNANTSEGFDPIKDASFPEINLQPGLKDSFVGGPPASKRSILAFFAGGNHGPIRPILLEHWENKDEDIQV HKYLPKGVSYYGMLRNSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKMFSVNVSVKEIPNLKDILTSI |
Full Sequence |
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Protein Sequence Length: 524 Download |
MVGSSRWINC CAWWGSEASS TMRIFLFMVP LLVLAGFASI KGSSVYNGRD SIAKRYALSS 60 SLITRSNFSS QTFLPPPNSS LQTIYPSSNS SLQTLHQSNE TEVNVSIPKS NSAPANESDE 120 SHPREKQKRK PSFLDRTEVV LAQARATIRE AKNWNLTQDS DYVPIGPMYW NAKEFHRSYL 180 EMEKQFKVFV YEEGELPVFH DGPCSSIYST EGSFIHAIEM NEHFRTRDPK KANVFFLPFS 240 IAWMVRYVYI RNSYDFGPIK RTVRDYVNVI ATRYPYWNRS LGADHFMLSC HDWGPETSKS 300 IPYLRKNSIR VLCNANTSEG FDPIKDASFP EINLQPGLKD SFVGGPPASK RSILAFFAGG 360 NHGPIRPILL EHWENKDEDI QVHKYLPKGV SYYGMLRNSK FCLCPSGYEV ASPRVVEAIY 420 TGCVPVLISE HYVPPFSDVL NWKMFSVNVS VKEIPNLKDI LTSISPRQYI RMQKRVGQIR 480 RHFEVHSPPK RYDVFHMILH SVWLRRLNFR VHDDINDFLS GNN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-66 | 182 | 464 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 116 | 513 | 10 | 407 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 77 | 513 | 88 | 517 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 182 | 512 | 1 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 182 | 508 | 1 | 327 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 155 | 514 | 209 | 568 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |